BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F06LP1|AL429601
(762 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1181 0.0
>3x_Contig1727
Length = 17872
Score = 1181 bits (591), Expect = 0.0
Identities = 712/762 (93%), Gaps = 2/762 (0%)
Strand = Plus / Minus
Query: 1 atcagccntcttcaaagatggggcatcgttaacaccgtcaccagtcatagcaaccaagta 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17188 atcagccttcttcaaagatggggcatcgttaacaccgtcaccagtcatagcaaccaagta 17129
Query: 61 acctctttgttgcaagatttcaacgacgttgtacttgtgttgtgggaaaacttcagcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17128 acctctttgttgcaagatttcaacgacgttgtacttgtgttgtgggaaaacttcagcgaa 17069
Query: 121 accatcagcattttcaacgaaatcggccaattcggaacctggcatgtcaccaccaccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17068 accatcagcattttcaacgaaatcggccaattcggaacctggcatgtcaccaccaccacc 17009
Query: 181 tagacctaatctttcagcgttgtaaatgttagtacccaaacccaattgtctacaagtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17008 tagacctaatctttcagcgttgtaaatgttagtacccaaacccaattgtctacaagtttc 16949
Query: 241 cttagcaataccgacagcgtcaccagttaacaacttaactctcaaacccaagtgtctagc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16948 cttagcaataccgacagcgtcaccagttaacatcttaactctcaaacccaagtgtctagc 16889
Query: 301 ttcgttgacagtttgagcagtgtcatctctaggaggamccatacatggcataacacccaa 360
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 16888 ttcgttgacagtttgagcagtgtcatctcttggaggatccatacatggcataacacccaa 16829
Query: 361 taawtcccagtgaccttcacctctcttttctggcaacacccaaggctctgaaacctctgg 420
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 16828 aatttcccagtgaccttcacctctc-tttctggcaacacccaaggctctgaaacctctgg 16770
Query: 421 aagccaattacagcaaccttgnattcgnagttttcacggacatcttccggaatcggangn 480
||||||||| ||||||||||| |||| ||||||||||||||||||| ||||| ||| |
Sbjct: 16769 aagccaatt-cagcaaccttgttttcgtagttttcacggacatcttctggaattggatgt 16711
Query: 481 ccntctncaacagtctncaagacgaacaaaggagcaccctnaacacaaangaanctvnca 540
| ||| ||||||||| |||||||||||| |||||||||| |||||||| || || ||
Sbjct: 16710 tcttcttcaacagtcttcaagacgaacaatggagcacccttaacacaaatgattctttca 16651
Query: 541 ccnncnggagatncgacaanagcggtaaccttcttggaaacagggtcgaangggtggaat 600
|| | |||||| |||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 16650 ccttctggagattcgacaatagcggtaaccttcttggaaacagggtcgaatgggtggaat 16591
Query: 601 tccaacaacttgnacttagncaaagcagcctnggctcnggggnaagagaacaaagwtttc 660
|||||||||||| |||||| ||||||||||| ||||| ||| |||||| ||||| ||||
Sbjct: 16590 tccaacaacttgtacttagtcaaagcagccttggctcttgggtaagagatcaaagatttc 16531
Query: 661 aagaaagcyttttcaatggyatccaaaccytttttttttytagaagcagccaaacaagca 720
|||||||| || ||||||| ||||||||| || || ||| ||||||||||||||||||||
Sbjct: 16530 aagaaagccttgtcaatggcatccaaacccttcttctttctagaagcagccaaacaagca 16471
Query: 721 gtcaacawcaagtcatctgggtcaacaccttcaacagtgtaa 762
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 16470 gtcaacatcaagtcatctgggtcaacaccttcaacagtgtaa 16429
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3281
Number of Sequences: 1807
Number of extensions: 3281
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 762
length of database: 10,358,551
effective HSP length: 16
effective length of query: 746
effective length of database: 10,329,639
effective search space: 7705910694
effective search space used: 7705910694
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)